Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.31■□□□□ 0.04
Kdm3aQ6PCM1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm14109-201ENSMUST00000118814 309 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm27046-201ENSMUST00000182160 463 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm8885-201ENSMUST00000189382 598 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm6082-201ENSMUST00000215204 454 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
Kdm3aQ6PCM1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm15276-201ENSMUST00000145953 498 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm24845-201ENSMUST00000158034 109 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm28882-201ENSMUST00000185504 314 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm4857-201ENSMUST00000192718 785 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm8712-201ENSMUST00000221090 701 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Kdm3aQ6PCM1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Gm13665-201ENSMUST00000120830 528 ntBASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Kdm3aQ6PCM1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms