Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Ctr9Q62018 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.04■□□□□ -0
Ctr9Q62018 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ctr9Q62018 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.04■□□□□ -0
Ctr9Q62018 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ctr9Q62018 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ctr9Q62018 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.03■□□□□ -0
Ctr9Q62018 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ctr9Q62018 Gm13492-201ENSMUST00000119772 665 ntBASIC15.03■□□□□ -0
Ctr9Q62018 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.03■□□□□ -0
Ctr9Q62018 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.03■□□□□ -0
Ctr9Q62018 Gm44364-201ENSMUST00000198368 141 ntBASIC15.03■□□□□ -0
Ctr9Q62018 Gm5904-201ENSMUST00000210286 865 ntBASIC15.03■□□□□ -0
Ctr9Q62018 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.03■□□□□ -0
Ctr9Q62018 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ctr9Q62018 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ctr9Q62018 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ctr9Q62018 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ctr9Q62018 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.02■□□□□ -0
Ctr9Q62018 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Gm10434-201ENSMUST00000101158 471 ntBASIC15.02■□□□□ -0
Ctr9Q62018 Gm22323-201ENSMUST00000103832 109 ntBASIC15.02■□□□□ -0
Ctr9Q62018 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.02■□□□□ -0
Ctr9Q62018 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ctr9Q62018 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ctr9Q62018 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Ctr9Q62018 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Ctr9Q62018 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ctr9Q62018 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gm24255-201ENSMUST00000104481 128 ntBASIC15.01□□□□□ -0.01
Ctr9Q62018 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.01□□□□□ -0.01
Ctr9Q62018 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gm37259-201ENSMUST00000193903 849 ntBASIC15.01□□□□□ -0.01
Ctr9Q62018 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ctr9Q62018 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.01□□□□□ -0.01
Ctr9Q62018 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.01□□□□□ -0.01
Ctr9Q62018 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.01□□□□□ -0.01
Ctr9Q62018 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms