Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm24844-201ENSMUST00000158679 127 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm5621-201ENSMUST00000187303 640 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm14585-201ENSMUST00000120713 634 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm12030-201ENSMUST00000121917 223 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm18059-201ENSMUST00000208073 580 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.94□□□□□ -0.18
Col11a1Q61245 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col11a1Q61245 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.94□□□□□ -0.18
Col11a1Q61245 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col11a1Q61245 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.93□□□□□ -0.18
Col11a1Q61245 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.93□□□□□ -0.18
Col11a1Q61245 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Gm9645-201ENSMUST00000197131 792 ntBASIC13.93□□□□□ -0.18
Col11a1Q61245 Gm42657-201ENSMUST00000201746 211 ntBASIC13.93□□□□□ -0.18
Col11a1Q61245 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.93□□□□□ -0.18
Col11a1Q61245 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.93□□□□□ -0.18
Col11a1Q61245 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col11a1Q61245 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col11a1Q61245 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm14193-201ENSMUST00000105067 153 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm29410-201ENSMUST00000188383 694 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms