Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Smn1P97801 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.9□□□□□ -0.66
Smn1P97801 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smn1P97801 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smn1P97801 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.9□□□□□ -0.66
Smn1P97801 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smn1P97801 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smn1P97801 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smn1P97801 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.9□□□□□ -0.66
Smn1P97801 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.9□□□□□ -0.66
Smn1P97801 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.9□□□□□ -0.66
Smn1P97801 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.9□□□□□ -0.66
Smn1P97801 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.9□□□□□ -0.66
Smn1P97801 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smn1P97801 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smn1P97801 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.9□□□□□ -0.67
Smn1P97801 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smn1P97801 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Smn1P97801 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smn1P97801 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.89□□□□□ -0.67
Smn1P97801 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smn1P97801 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.89□□□□□ -0.67
Smn1P97801 Cog3-203ENSMUST00000227473 4197 ntBASIC10.89□□□□□ -0.67
Smn1P97801 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Gm27306-201ENSMUST00000183970 107 ntBASIC10.89□□□□□ -0.67
Smn1P97801 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.89□□□□□ -0.67
Smn1P97801 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.89□□□□□ -0.67
Smn1P97801 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smn1P97801 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Smn1P97801 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Smn1P97801 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smn1P97801 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms