Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdh5P55284 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Mir874-201ENSMUST00000104769 76 ntBASIC12.43□□□□□ -0.42
Cdh5P55284 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh5P55284 Gm11425-201ENSMUST00000119608 498 ntBASIC12.43□□□□□ -0.42
Cdh5P55284 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh5P55284 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.43□□□□□ -0.42
Cdh5P55284 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.43□□□□□ -0.42
Cdh5P55284 Gm9396-201ENSMUST00000076703 567 ntBASIC12.43□□□□□ -0.42
Cdh5P55284 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdh5P55284 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.43□□□□□ -0.42
Cdh5P55284 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh5P55284 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh5P55284 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Cdh5P55284 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdh5P55284 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Gm8652-201ENSMUST00000181363 964 ntBASIC12.42□□□□□ -0.42
Cdh5P55284 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Gm18062-201ENSMUST00000208020 547 ntBASIC12.42□□□□□ -0.42
Cdh5P55284 Gm18055-201ENSMUST00000208254 547 ntBASIC12.42□□□□□ -0.42
Cdh5P55284 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.42□□□□□ -0.42
Cdh5P55284 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdh5P55284 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.42□□□□□ -0.42
Cdh5P55284 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdh5P55284 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh5P55284 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh5P55284 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh5P55284 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh5P55284 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh5P55284 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms