Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox3P53784 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox3P53784 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.22□□□□□ -0.45
Sox3P53784 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox3P53784 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox3P53784 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox3P53784 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.22□□□□□ -0.45
Sox3P53784 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox3P53784 Gm8959-201ENSMUST00000213150 571 ntBASIC12.22□□□□□ -0.45
Sox3P53784 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.22□□□□□ -0.45
Sox3P53784 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.22□□□□□ -0.45
Sox3P53784 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.22□□□□□ -0.45
Sox3P53784 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox3P53784 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Gm14028-201ENSMUST00000117434 479 ntBASIC12.21□□□□□ -0.45
Sox3P53784 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Sox3P53784 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox3P53784 Morn2-202ENSMUST00000227729 656 ntBASIC12.21□□□□□ -0.45
Sox3P53784 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox3P53784 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.21□□□□□ -0.46
Sox3P53784 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Sox3P53784 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox3P53784 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.2□□□□□ -0.46
Sox3P53784 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.2□□□□□ -0.46
Sox3P53784 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox3P53784 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox3P53784 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox3P53784 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox3P53784 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox3P53784 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox3P53784 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sox3P53784 Gm7857-201ENSMUST00000117957 358 ntBASIC12.2□□□□□ -0.46
Sox3P53784 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms