Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.75□□□□□ -0.69
Cxcl13O55038 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm14999-201ENSMUST00000121039 624 ntBASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.75□□□□□ -0.69
Cxcl13O55038 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm8712-201ENSMUST00000221090 701 ntBASIC10.75□□□□□ -0.69
Cxcl13O55038 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cxcl13O55038 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cxcl13O55038 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm14109-201ENSMUST00000118814 309 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm13315-201ENSMUST00000120376 991 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cxcl13O55038 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cxcl13O55038 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.74□□□□□ -0.69
Cxcl13O55038 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.74□□□□□ -0.69
Cxcl13O55038 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms