Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4cQ9D7F7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Mir686-201ENSMUST00000102174 109 ntBASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4cQ9D7F7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms