Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atxn3Q9CVD2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atxn3Q9CVD2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Atxn3Q9CVD2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atxn3Q9CVD2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atxn3Q9CVD2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.37■□□□□ 0.21
Atxn3Q9CVD2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Gm13736-201ENSMUST00000119272 253 ntBASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atxn3Q9CVD2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Gm15370-201ENSMUST00000117158 253 ntBASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atxn3Q9CVD2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm15198-201ENSMUST00000117283 177 ntBASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm13315-201ENSMUST00000120376 991 ntBASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm45331-201ENSMUST00000209868 554 ntBASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm7046-201ENSMUST00000221351 977 ntBASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Atxn3Q9CVD2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atxn3Q9CVD2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms