Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm44636-201ENSMUST00000206130 755 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm45399-201ENSMUST00000209955 1016 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.79■□□□□ 0.28
Rtn4Q99P72 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4Q99P72 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Gm15515-201ENSMUST00000117827 822 ntBASIC16.78■□□□□ 0.28
Rtn4Q99P72 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Gm45784-201ENSMUST00000188360 142 ntBASIC16.78■□□□□ 0.28
Rtn4Q99P72 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC16.78■□□□□ 0.28
Rtn4Q99P72 Gm42640-201ENSMUST00000199792 1195 ntBASIC16.78■□□□□ 0.28
Rtn4Q99P72 Gm45845-201ENSMUST00000207326 582 ntBASIC16.78■□□□□ 0.28
Rtn4Q99P72 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 AC116589.9-201ENSMUST00000221462 908 ntBASIC16.78■□□□□ 0.28
Rtn4Q99P72 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4Q99P72 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.77■□□□□ 0.28
Rtn4Q99P72 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.77■□□□□ 0.28
Rtn4Q99P72 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Gm22331-201ENSMUST00000158066 136 ntBASIC16.77■□□□□ 0.28
Rtn4Q99P72 Gm25653-201ENSMUST00000158473 138 ntBASIC16.77■□□□□ 0.28
Rtn4Q99P72 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.77■□□□□ 0.28
Rtn4Q99P72 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4Q99P72 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC16.77■□□□□ 0.27
Rtn4Q99P72 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.77■□□□□ 0.27
Rtn4Q99P72 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rtn4Q99P72 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn4Q99P72 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn4Q99P72 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Rtn4Q99P72 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn4Q99P72 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms