Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf8Q8VC56 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf8Q8VC56 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf8Q8VC56 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Rnf8Q8VC56 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Rnf8Q8VC56 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Matn2-203ENSMUST00000226766 3252 ntBASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf8Q8VC56 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm12138-201ENSMUST00000122180 951 ntBASIC12.32□□□□□ -0.44
Rnf8Q8VC56 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm6244-201ENSMUST00000178732 841 ntBASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf8Q8VC56 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms