Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm11450-201ENSMUST00000121144 333 ntBASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm23363-201ENSMUST00000175024 79 ntBASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm12165-201ENSMUST00000117047 342 ntBASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm14460-201ENSMUST00000121511 639 ntBASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a6Q8C6K9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a6Q8C6K9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms