Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.94□□□□□ -0.5
Cpne1Q8C166 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne1Q8C166 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.93□□□□□ -0.5
Cpne1Q8C166 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm14704-201ENSMUST00000120300 874 ntBASIC11.93□□□□□ -0.5
Cpne1Q8C166 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.93□□□□□ -0.5
Cpne1Q8C166 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.93□□□□□ -0.5
Cpne1Q8C166 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.93□□□□□ -0.5
Cpne1Q8C166 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne1Q8C166 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne1Q8C166 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.92□□□□□ -0.5
Cpne1Q8C166 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.92□□□□□ -0.5
Cpne1Q8C166 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.92□□□□□ -0.5
Cpne1Q8C166 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.92□□□□□ -0.5
Cpne1Q8C166 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.92□□□□□ -0.5
Cpne1Q8C166 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.92□□□□□ -0.5
Cpne1Q8C166 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne1Q8C166 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.91□□□□□ -0.5
Cpne1Q8C166 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne1Q8C166 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms