Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.16□□□□□ -0.62
Lrtm1Q8BXQ3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Gm16296-201ENSMUST00000159905 325 ntBASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lrtm1Q8BXQ3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.15□□□□□ -0.63
Lrtm1Q8BXQ3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lrtm1Q8BXQ3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lrtm1Q8BXQ3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Lrtm1Q8BXQ3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.15□□□□□ -0.63
Lrtm1Q8BXQ3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Gm38002-201ENSMUST00000193255 180 ntBASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Gm8099-201ENSMUST00000200510 742 ntBASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Gm43630-201ENSMUST00000201550 776 ntBASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Lrtm1Q8BXQ3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lrtm1Q8BXQ3 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.13□□□□□ -0.63
Lrtm1Q8BXQ3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lrtm1Q8BXQ3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lrtm1Q8BXQ3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms