Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Gm11439-201ENSMUST00000118598 409 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Gm4909-201ENSMUST00000118749 794 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.96□□□□□ -0.17
Ush1gQ80T11 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.96□□□□□ -0.17
Ush1gQ80T11 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush1gQ80T11 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.96□□□□□ -0.18
Ush1gQ80T11 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ush1gQ80T11 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Gm14704-201ENSMUST00000120300 874 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Gm13665-201ENSMUST00000120830 528 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.95□□□□□ -0.18
Ush1gQ80T11 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Gm44967-201ENSMUST00000207047 631 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ush1gQ80T11 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.95□□□□□ -0.18
Ush1gQ80T11 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.94□□□□□ -0.18
Ush1gQ80T11 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.94□□□□□ -0.18
Ush1gQ80T11 Mir6979-201ENSMUST00000183927 56 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms