Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pif1Q80SX8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm24830-201ENSMUST00000102024 166 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm25890-201ENSMUST00000177643 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm22614-201ENSMUST00000178300 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Mir7221-201ENSMUST00000184009 72 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm5904-201ENSMUST00000210286 865 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 AC173482.3-201ENSMUST00000225492 1212 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm22042-201ENSMUST00000082989 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm26232-201ENSMUST00000083360 166 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm24136-201ENSMUST00000083374 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm26110-201ENSMUST00000083971 165 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.85□□□□□ -0.51
Pif1Q80SX8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pif1Q80SX8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.84□□□□□ -0.51
Pif1Q80SX8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.84□□□□□ -0.51
Pif1Q80SX8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pif1Q80SX8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pif1Q80SX8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.84□□□□□ -0.51
Pif1Q80SX8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Pif1Q80SX8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms