Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Gm9630-201ENSMUST00000178304 885 ntBASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43aQ3TL54 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gm13689-201ENSMUST00000119360 685 ntBASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gm26035-201ENSMUST00000083065 308 ntBASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43aQ3TL54 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43aQ3TL54 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim43aQ3TL54 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43aQ3TL54 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim43aQ3TL54 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43aQ3TL54 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.52□□□□□ -0.24
Trim43aQ3TL54 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Gm19184-201ENSMUST00000196798 928 ntBASIC13.52□□□□□ -0.25
Trim43aQ3TL54 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trim43aQ3TL54 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms