Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.45□□□□□ -0.1
GabpaQ00422 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
GabpaQ00422 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GabpaQ00422 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
GabpaQ00422 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GabpaQ00422 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GabpaQ00422 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.44□□□□□ -0.1
GabpaQ00422 Gm11439-201ENSMUST00000118598 409 ntBASIC14.44□□□□□ -0.1
GabpaQ00422 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GabpaQ00422 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.44□□□□□ -0.1
GabpaQ00422 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GabpaQ00422 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GabpaQ00422 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.44□□□□□ -0.1
GabpaQ00422 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GabpaQ00422 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GabpaQ00422 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
GabpaQ00422 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GabpaQ00422 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
GabpaQ00422 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Gm12314-201ENSMUST00000118104 538 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Gm11597-201ENSMUST00000121423 964 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.43□□□□□ -0.1
GabpaQ00422 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.43□□□□□ -0.1
GabpaQ00422 Mir5132-201ENSMUST00000175166 71 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Gm27023-201ENSMUST00000182372 285 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Gm18212-201ENSMUST00000211678 889 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.43□□□□□ -0.1
GabpaQ00422 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.43□□□□□ -0.1
GabpaQ00422 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.43□□□□□ -0.1
GabpaQ00422 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.43□□□□□ -0.1
GabpaQ00422 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
GabpaQ00422 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GabpaQ00422 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
GabpaQ00422 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GabpaQ00422 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.43□□□□□ -0.1
GabpaQ00422 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GabpaQ00422 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms