Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Stra8P70278 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Gm11918-201ENSMUST00000121660 179 ntBASIC17.61■□□□□ 0.41
Stra8P70278 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.61■□□□□ 0.41
Stra8P70278 Gm9794-201ENSMUST00000202370 423 ntBASIC17.61■□□□□ 0.41
Stra8P70278 Gm45384-201ENSMUST00000210451 277 ntBASIC17.61■□□□□ 0.41
Stra8P70278 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Stra8P70278 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Stra8P70278 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.61■□□□□ 0.41
Stra8P70278 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC17.61■□□□□ 0.41
Stra8P70278 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stra8P70278 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Stra8P70278 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.6■□□□□ 0.41
Stra8P70278 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.6■□□□□ 0.41
Stra8P70278 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.6■□□□□ 0.41
Stra8P70278 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.6■□□□□ 0.41
Stra8P70278 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.6■□□□□ 0.41
Stra8P70278 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Stra8P70278 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Stra8P70278 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.6■□□□□ 0.41
Stra8P70278 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC17.6■□□□□ 0.41
Stra8P70278 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stra8P70278 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Gm13722-201ENSMUST00000117964 3066 ntBASIC17.59■□□□□ 0.41
Stra8P70278 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Stra8P70278 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Stra8P70278 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Stra8P70278 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.59■□□□□ 0.41
Stra8P70278 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.59■□□□□ 0.41
Stra8P70278 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.59■□□□□ 0.41
Stra8P70278 Gm28911-201ENSMUST00000188837 117 ntBASIC17.59■□□□□ 0.41
Stra8P70278 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.59■□□□□ 0.41
Stra8P70278 Gm44124-201ENSMUST00000204159 472 ntBASIC17.59■□□□□ 0.41
Stra8P70278 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.59■□□□□ 0.41
Stra8P70278 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.59■□□□□ 0.41
Stra8P70278 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC17.59■□□□□ 0.41
Stra8P70278 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Stra8P70278 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stra8P70278 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stra8P70278 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.58■□□□□ 0.41
Stra8P70278 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stra8P70278 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.58■□□□□ 0.41
Stra8P70278 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Stra8P70278 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stra8P70278 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Stra8P70278 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Stra8P70278 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Stra8P70278 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms