Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm12341-201ENSMUST00000119724 503 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm28631-201ENSMUST00000190740 334 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm6983-201ENSMUST00000214912 628 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm6218-201ENSMUST00000219812 628 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.16□□□□□ -0.94
Ube2d3P61079 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Ube2d3P61079 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ube2d3P61079 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.15□□□□□ -0.94
Ube2d3P61079 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.15□□□□□ -0.94
Ube2d3P61079 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm44855-201ENSMUST00000205725 362 ntBASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
Ube2d3P61079 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ube2d3P61079 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.15□□□□□ -0.95
Ube2d3P61079 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ube2d3P61079 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.15□□□□□ -0.95
Ube2d3P61079 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube2d3P61079 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube2d3P61079 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube2d3P61079 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube2d3P61079 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube2d3P61079 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms