Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lbx1P52955 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Lbx1P52955 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lbx1P52955 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lbx1P52955 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lbx1P52955 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lbx1P52955 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.33□□□□□ -0.44
Lbx1P52955 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.33□□□□□ -0.44
Lbx1P52955 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Lbx1P52955 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Lbx1P52955 Gm26368-201ENSMUST00000157826 118 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lbx1P52955 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Gm22121-201ENSMUST00000175148 54 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Gm25998-201ENSMUST00000175397 53 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lbx1P52955 Mir6941-201ENSMUST00000184711 59 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Gm17877-201ENSMUST00000192578 814 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Gm37299-201ENSMUST00000193951 826 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Gm38092-201ENSMUST00000195600 653 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lbx1P52955 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lbx1P52955 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.33□□□□□ -0.44
Lbx1P52955 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lbx1P52955 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
Lbx1P52955 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Gm24891-201ENSMUST00000104391 136 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Gm11956-201ENSMUST00000119525 512 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Gm7722-201ENSMUST00000120646 741 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Gm12196-201ENSMUST00000120954 262 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Gm14832-201ENSMUST00000121289 322 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.32□□□□□ -0.44
Lbx1P52955 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms