Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Xcl1P47993 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Gm44260-201ENSMUST00000204946 2094 ntBASIC8.2□□□□□ -1.1
Xcl1P47993 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Xcl1P47993 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Xcl1P47993 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Xcl1P47993 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Xcl1P47993 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Xcl1P47993 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC8.19□□□□□ -1.1
Xcl1P47993 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Xcl1P47993 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Xcl1P47993 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Xcl1P47993 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Ighv1-60-201ENSMUST00000195816 405 ntBASIC8.19□□□□□ -1.1
Xcl1P47993 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC8.19□□□□□ -1.1
Xcl1P47993 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Gm5364-201ENSMUST00000216789 889 ntBASIC8.19□□□□□ -1.1
Xcl1P47993 AC169036.1-201ENSMUST00000227994 296 ntBASIC8.19□□□□□ -1.1
Xcl1P47993 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC8.19□□□□□ -1.1
Xcl1P47993 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 CT010480.4-201ENSMUST00000224654 2283 ntBASIC8.19□□□□□ -1.1
Xcl1P47993 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC8.19□□□□□ -1.1
Xcl1P47993 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Xcl1P47993 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC8.18□□□□□ -1.1
Xcl1P47993 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
Xcl1P47993 CT009713.5-203ENSMUST00000224218 2079 ntBASIC8.18□□□□□ -1.1
Xcl1P47993 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Xcl1P47993 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Xcl1P47993 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC8.18□□□□□ -1.1
Xcl1P47993 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Xcl1P47993 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Xcl1P47993 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Xcl1P47993 Gm9466-201ENSMUST00000218144 2246 ntBASIC8.18□□□□□ -1.1
Xcl1P47993 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Xcl1P47993 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms