Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.64□□□□□ -0.39
PrkcdP28867 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.64□□□□□ -0.39
PrkcdP28867 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkcdP28867 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PrkcdP28867 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PrkcdP28867 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.63□□□□□ -0.39
PrkcdP28867 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PrkcdP28867 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.63□□□□□ -0.39
PrkcdP28867 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.63□□□□□ -0.39
PrkcdP28867 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.63□□□□□ -0.39
PrkcdP28867 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.63□□□□□ -0.39
PrkcdP28867 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.63□□□□□ -0.39
PrkcdP28867 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.63□□□□□ -0.39
PrkcdP28867 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.63□□□□□ -0.39
PrkcdP28867 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.63□□□□□ -0.39
PrkcdP28867 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkcdP28867 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PrkcdP28867 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PrkcdP28867 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PrkcdP28867 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Gm10576-201ENSMUST00000191927 825 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Gm37935-201ENSMUST00000192012 982 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.62□□□□□ -0.39
PrkcdP28867 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Gm19220-201ENSMUST00000222682 803 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
PrkcdP28867 Gm16372-201ENSMUST00000073088 450 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
PrkcdP28867 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
PrkcdP28867 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
PrkcdP28867 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.62□□□□□ -0.39
PrkcdP28867 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkcdP28867 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkcdP28867 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PrkcdP28867 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkcdP28867 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkcdP28867 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PrkcdP28867 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkcdP28867 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.61□□□□□ -0.39
PrkcdP28867 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PrkcdP28867 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PrkcdP28867 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.61□□□□□ -0.39
PrkcdP28867 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrkcdP28867 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkcdP28867 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms