Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.24□□□□□ -0.45
Hcn1O88704 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.24□□□□□ -0.45
Hcn1O88704 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.24□□□□□ -0.45
Hcn1O88704 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gm25857-201ENSMUST00000082788 129 ntBASIC12.24□□□□□ -0.45
Hcn1O88704 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.24□□□□□ -0.45
Hcn1O88704 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.24□□□□□ -0.45
Hcn1O88704 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hcn1O88704 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hcn1O88704 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.23□□□□□ -0.45
Hcn1O88704 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Hcn1O88704 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.23□□□□□ -0.45
Hcn1O88704 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Gm24644-201ENSMUST00000157114 139 ntBASIC12.23□□□□□ -0.45
Hcn1O88704 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.23□□□□□ -0.45
Hcn1O88704 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hcn1O88704 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Hcn1O88704 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hcn1O88704 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.23□□□□□ -0.45
Hcn1O88704 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Hcn1O88704 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.22□□□□□ -0.45
Hcn1O88704 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.22□□□□□ -0.45
Hcn1O88704 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hcn1O88704 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hcn1O88704 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Hcn1O88704 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hcn1O88704 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.22□□□□□ -0.45
Hcn1O88704 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Gm22331-201ENSMUST00000158066 136 ntBASIC12.22□□□□□ -0.45
Hcn1O88704 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.22□□□□□ -0.45
Hcn1O88704 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Gm29649-201ENSMUST00000185649 419 ntBASIC12.22□□□□□ -0.45
Hcn1O88704 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.22□□□□□ -0.45
Hcn1O88704 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.22□□□□□ -0.45
Hcn1O88704 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.22□□□□□ -0.45
Hcn1O88704 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.22□□□□□ -0.45
Hcn1O88704 Gm16372-201ENSMUST00000073088 450 ntBASIC12.22□□□□□ -0.45
Hcn1O88704 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Hcn1O88704 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms