Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14□□□□□ -0.17
Trdmt1O55055 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14□□□□□ -0.17
Trdmt1O55055 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Trdmt1O55055 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14□□□□□ -0.17
Trdmt1O55055 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14□□□□□ -0.17
Trdmt1O55055 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14□□□□□ -0.17
Trdmt1O55055 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14□□□□□ -0.17
Trdmt1O55055 Rmrp-201ENSMUST00000157463 271 ntBASIC14□□□□□ -0.17
Trdmt1O55055 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trdmt1O55055 Gm7848-201ENSMUST00000210739 718 ntBASIC14□□□□□ -0.17
Trdmt1O55055 AL732506.1-201ENSMUST00000226420 281 ntBASIC14□□□□□ -0.17
Trdmt1O55055 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trdmt1O55055 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trdmt1O55055 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trdmt1O55055 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm12380-201ENSMUST00000119012 544 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm18734-201ENSMUST00000172937 808 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm9230-201ENSMUST00000188228 532 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm29787-201ENSMUST00000222129 849 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.99□□□□□ -0.17
Trdmt1O55055 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trdmt1O55055 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdmt1O55055 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.98□□□□□ -0.17
Trdmt1O55055 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.98□□□□□ -0.17
Trdmt1O55055 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trdmt1O55055 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trdmt1O55055 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trdmt1O55055 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdmt1O55055 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms