Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC28A2O43868 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.31■□□□□ 0.04
SLC28A2O43868 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC28A2O43868 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC28A2O43868 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC28A2O43868 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SLC28A2O43868 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SLC28A2O43868 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC28A2O43868 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC28A2O43868 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC28A2O43868 AC027307.2-201ENST00000591252 911 ntBASIC15.31■□□□□ 0.04
SLC28A2O43868 AL009183.1-201ENST00000603760 355 ntBASIC15.31■□□□□ 0.04
SLC28A2O43868 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC28A2O43868 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC28A2O43868 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC28A2O43868 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC28A2O43868 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC28A2O43868 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC28A2O43868 AL592424.1-201ENST00000563624 1536 ntBASIC15.31■□□□□ 0.04
SLC28A2O43868 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC28A2O43868 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A2O43868 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 AC103702.1-201ENST00000548801 2630 ntBASIC15.3■□□□□ 0.04
SLC28A2O43868 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 MIR600HG-201ENST00000449175 5984 ntBASIC15.3■□□□□ 0.04
SLC28A2O43868 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC28A2O43868 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC28A2O43868 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC28A2O43868 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 AC087499.6-201ENST00000411576 835 ntBASIC15.3■□□□□ 0.04
SLC28A2O43868 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 CDC14C-201ENST00000428251 1719 ntBASIC15.3■□□□□ 0.04
SLC28A2O43868 AC234783.1-201ENST00000441761 496 ntBASIC15.3■□□□□ 0.04
SLC28A2O43868 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 LINC02447-202ENST00000501888 2146 ntBASIC15.3■□□□□ 0.04
SLC28A2O43868 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC28A2O43868 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms