Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d4aQ9D7V1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Mir7684-201ENSMUST00000183858 60 ntBASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Map1b-203ENSMUST00000223725 2669 ntBASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d4aQ9D7V1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm22189-201ENSMUST00000103822 86 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm42550-201ENSMUST00000201553 960 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Gm26315-201ENSMUST00000083890 321 ntBASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d4aQ9D7V1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sh2d4aQ9D7V1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sh2d4aQ9D7V1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d4aQ9D7V1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms