Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm27731-201ENSMUST00000185192 107 ntBASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gm29755-201ENSMUST00000196976 948 ntBASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gm16372-201ENSMUST00000073088 450 ntBASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.13□□□□□ -0.31
Retreg3Q9CQV4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm27331-201ENSMUST00000183705 60 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm28693-202ENSMUST00000190758 331 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm37785-201ENSMUST00000195783 2408 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retreg3Q9CQV4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Mir686-201ENSMUST00000102174 109 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms