Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm12928-201ENSMUST00000117115 573 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm27892-201ENSMUST00000185017 106 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm2495-201ENSMUST00000191160 466 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm8463-201ENSMUST00000208573 613 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm18473-201ENSMUST00000220543 868 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf8Q8VC56 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm7287-201ENSMUST00000205267 602 ntBASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Gm26315-201ENSMUST00000083890 321 ntBASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf8Q8VC56 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms