Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.63□□□□□ -0.55
Ebf4Q8K4J2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm6447-201ENSMUST00000118905 835 ntBASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm14822-201ENSMUST00000122247 291 ntBASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf4Q8K4J2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Gm27397-201ENSMUST00000184997 107 ntBASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Gm5161-201ENSMUST00000075243 853 ntBASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf4Q8K4J2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf4Q8K4J2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms