Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.12□□□□□ -0.15
Ift88Q61371 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.12□□□□□ -0.15
Ift88Q61371 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.12□□□□□ -0.15
Ift88Q61371 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ift88Q61371 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ift88Q61371 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.12□□□□□ -0.15
Ift88Q61371 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ift88Q61371 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.12□□□□□ -0.15
Ift88Q61371 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.12□□□□□ -0.15
Ift88Q61371 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ift88Q61371 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.12□□□□□ -0.15
Ift88Q61371 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ift88Q61371 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.12□□□□□ -0.15
Ift88Q61371 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.11□□□□□ -0.15
Ift88Q61371 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ift88Q61371 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.11□□□□□ -0.15
Ift88Q61371 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.11□□□□□ -0.15
Ift88Q61371 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.11□□□□□ -0.15
Ift88Q61371 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Gm26035-201ENSMUST00000083065 308 ntBASIC14.11□□□□□ -0.15
Ift88Q61371 Mir339-201ENSMUST00000083659 96 ntBASIC14.11□□□□□ -0.15
Ift88Q61371 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ift88Q61371 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ift88Q61371 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ift88Q61371 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.1□□□□□ -0.15
Ift88Q61371 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.1□□□□□ -0.15
Ift88Q61371 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.1□□□□□ -0.15
Ift88Q61371 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.1□□□□□ -0.15
Ift88Q61371 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.1□□□□□ -0.15
Ift88Q61371 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ift88Q61371 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ift88Q61371 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.09□□□□□ -0.15
Ift88Q61371 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.09□□□□□ -0.15
Ift88Q61371 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm12928-201ENSMUST00000117115 573 ntBASIC14.09□□□□□ -0.15
Ift88Q61371 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.09□□□□□ -0.15
Ift88Q61371 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm2495-201ENSMUST00000191160 466 ntBASIC14.09□□□□□ -0.15
Ift88Q61371 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms