Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Urb1Q571H0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.77□□□□□ -0.53
Urb1Q571H0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.77□□□□□ -0.53
Urb1Q571H0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Urb1Q571H0 Gm9555-201ENSMUST00000200908 583 ntBASIC11.77□□□□□ -0.53
Urb1Q571H0 Gm45433-201ENSMUST00000209386 247 ntBASIC11.77□□□□□ -0.53
Urb1Q571H0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.77□□□□□ -0.53
Urb1Q571H0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Urb1Q571H0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Urb1Q571H0 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.77□□□□□ -0.53
Urb1Q571H0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.77□□□□□ -0.53
Urb1Q571H0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Urb1Q571H0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.76□□□□□ -0.53
Urb1Q571H0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Gm8194-201ENSMUST00000159783 859 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.76□□□□□ -0.53
Urb1Q571H0 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Urb1Q571H0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Urb1Q571H0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Urb1Q571H0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Urb1Q571H0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.76□□□□□ -0.53
Urb1Q571H0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Gm27438-201ENSMUST00000183480 110 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Gm37201-201ENSMUST00000191845 523 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Rprl1-202ENSMUST00000198476 238 ntBASIC11.76□□□□□ -0.53
Urb1Q571H0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Urb1Q571H0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.76□□□□□ -0.53
Urb1Q571H0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Urb1Q571H0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Urb1Q571H0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Urb1Q571H0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.75□□□□□ -0.53
Urb1Q571H0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.75□□□□□ -0.53
Urb1Q571H0 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.75□□□□□ -0.53
Urb1Q571H0 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.75□□□□□ -0.53
Urb1Q571H0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Urb1Q571H0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Urb1Q571H0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Urb1Q571H0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Urb1Q571H0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Urb1Q571H0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms