Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.8□□□□□ -0.52
Cacna1aP97445 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.8□□□□□ -0.52
Cacna1aP97445 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.8□□□□□ -0.52
Cacna1aP97445 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.8□□□□□ -0.52
Cacna1aP97445 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.8□□□□□ -0.52
Cacna1aP97445 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.8□□□□□ -0.52
Cacna1aP97445 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cacna1aP97445 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
Cacna1aP97445 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cacna1aP97445 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm6963-201ENSMUST00000147879 379 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm19353-201ENSMUST00000184561 445 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm27552-201ENSMUST00000183351 62 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm27844-201ENSMUST00000183613 62 ntBASIC11.79□□□□□ -0.52
Cacna1aP97445 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.79□□□□□ -0.52
Cacna1aP97445 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cacna1aP97445 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cacna1aP97445 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Rmrp-201ENSMUST00000157463 271 ntBASIC11.78□□□□□ -0.52
Cacna1aP97445 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.78□□□□□ -0.52
Cacna1aP97445 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.78□□□□□ -0.52
Cacna1aP97445 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Cog3-203ENSMUST00000227473 4197 ntBASIC11.78□□□□□ -0.52
Cacna1aP97445 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm44651-201ENSMUST00000207343 372 ntBASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm5369-201ENSMUST00000217499 588 ntBASIC11.78□□□□□ -0.52
Cacna1aP97445 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cacna1aP97445 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cacna1aP97445 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms