Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Rpl39P62892 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
Rpl39P62892 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rpl39P62892 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm38294-201ENSMUST00000192831 381 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Rpl39P62892 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.09□□□□□ -0.95
Rpl39P62892 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rpl39P62892 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rpl39P62892 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
Rpl39P62892 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.09□□□□□ -0.95
Rpl39P62892 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rpl39P62892 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Rpl39P62892 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Rpl39P62892 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Rpl39P62892 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Rpl39P62892 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms