Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.51□□□□□ -0.73
Timp3P39876 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.51□□□□□ -0.73
Timp3P39876 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Timp3P39876 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.51□□□□□ -0.73
Timp3P39876 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.51□□□□□ -0.73
Timp3P39876 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Timp3P39876 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.5□□□□□ -0.73
Timp3P39876 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.5□□□□□ -0.73
Timp3P39876 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Timp3P39876 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.5□□□□□ -0.73
Timp3P39876 Gm38266-201ENSMUST00000194931 421 ntBASIC10.5□□□□□ -0.73
Timp3P39876 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.5□□□□□ -0.73
Timp3P39876 Gm3961-201ENSMUST00000204425 994 ntBASIC10.5□□□□□ -0.73
Timp3P39876 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.5□□□□□ -0.73
Timp3P39876 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.5□□□□□ -0.73
Timp3P39876 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.5□□□□□ -0.73
Timp3P39876 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.5□□□□□ -0.73
Timp3P39876 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.5□□□□□ -0.73
Timp3P39876 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.5□□□□□ -0.73
Timp3P39876 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.5□□□□□ -0.73
Timp3P39876 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Timp3P39876 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.49□□□□□ -0.73
Timp3P39876 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Mir686-201ENSMUST00000102174 109 ntBASIC10.49□□□□□ -0.73
Timp3P39876 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Timp3P39876 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.49□□□□□ -0.73
Timp3P39876 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms