Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cd28P31041 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.25□□□□□ -0.61
Cd28P31041 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.25□□□□□ -0.61
Cd28P31041 Gm15376-201ENSMUST00000122258 783 ntBASIC11.25□□□□□ -0.61
Cd28P31041 Gm11594-201ENSMUST00000122313 162 ntBASIC11.25□□□□□ -0.61
Cd28P31041 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Cd28P31041 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.25□□□□□ -0.61
Cd28P31041 Gm17837-201ENSMUST00000186435 985 ntBASIC11.25□□□□□ -0.61
Cd28P31041 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 Gm44124-201ENSMUST00000204159 472 ntBASIC11.25□□□□□ -0.61
Cd28P31041 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.25□□□□□ -0.61
Cd28P31041 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.25□□□□□ -0.61
Cd28P31041 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.25□□□□□ -0.61
Cd28P31041 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cd28P31041 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd28P31041 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.24□□□□□ -0.61
Cd28P31041 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Cd28P31041 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.24□□□□□ -0.61
Cd28P31041 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.24□□□□□ -0.61
Cd28P31041 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.24□□□□□ -0.61
Cd28P31041 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cd28P31041 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Cd28P31041 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cd28P31041 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd28P31041 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.24□□□□□ -0.61
Cd28P31041 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cd28P31041 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd28P31041 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd28P31041 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cd28P31041 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd28P31041 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd28P31041 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cd28P31041 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cd28P31041 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms