Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Polr1aO35134 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC19.28■□□□□ 0.68
Polr1aO35134 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm15573-201ENSMUST00000119487 540 ntBASIC19.28■□□□□ 0.68
Polr1aO35134 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC19.28■□□□□ 0.68
Polr1aO35134 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC19.28■□□□□ 0.68
Polr1aO35134 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm45398-201ENSMUST00000210561 165 ntBASIC19.28■□□□□ 0.68
Polr1aO35134 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm3052-202ENSMUST00000188254 2224 ntBASIC19.28■□□□□ 0.68
Polr1aO35134 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC19.28■□□□□ 0.68
Polr1aO35134 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC19.27■□□□□ 0.68
Polr1aO35134 Gm18227-201ENSMUST00000211082 1468 ntBASIC19.27■□□□□ 0.68
Polr1aO35134 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Gm10731-201ENSMUST00000181171 448 ntBASIC19.27■□□□□ 0.68
Polr1aO35134 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC19.27■□□□□ 0.68
Polr1aO35134 AC122408.1-201ENSMUST00000218949 218 ntBASIC19.27■□□□□ 0.68
Polr1aO35134 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr1aO35134 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Polr1aO35134 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.27■□□□□ 0.67
Polr1aO35134 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC19.27■□□□□ 0.67
Polr1aO35134 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Polr1aO35134 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Polr1aO35134 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Polr1aO35134 Gm38228-201ENSMUST00000193169 1293 ntBASIC19.26■□□□□ 0.67
Polr1aO35134 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC19.26■□□□□ 0.67
Polr1aO35134 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Polr1aO35134 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC19.26■□□□□ 0.67
Polr1aO35134 Gm37795-201ENSMUST00000194216 2459 ntBASIC19.26■□□□□ 0.67
Polr1aO35134 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr1aO35134 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC19.25■□□□□ 0.67
Polr1aO35134 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Gm12579-201ENSMUST00000118040 783 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Polr1aO35134 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Gm9797-202ENSMUST00000218003 294 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC19.25■□□□□ 0.67
Polr1aO35134 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 AC158355.1-201ENSMUST00000215895 1705 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Polr1aO35134 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC19.25■□□□□ 0.67
Polr1aO35134 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 Rprl1-201ENSMUST00000158050 327 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC19.25■□□□□ 0.67
Polr1aO35134 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC19.25■□□□□ 0.67
Polr1aO35134 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Polr1aO35134 Gm43058-201ENSMUST00000197645 625 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr1aO35134 AC169036.1-201ENSMUST00000227994 296 ntBASIC19.25■□□□□ 0.67
Polr1aO35134 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms