Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm22614-201ENSMUST00000178300 165 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm9022-201ENSMUST00000182482 992 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm22042-201ENSMUST00000082989 165 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm26232-201ENSMUST00000083360 166 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm24136-201ENSMUST00000083374 165 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm26110-201ENSMUST00000083971 165 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm13665-201ENSMUST00000120830 528 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm14832-201ENSMUST00000121289 322 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm27023-201ENSMUST00000182372 285 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm4857-201ENSMUST00000192718 785 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.31□□□□□ -0.28
Scn1aA2APX8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1aA2APX8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm15236-201ENSMUST00000117309 379 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm15808-201ENSMUST00000119046 604 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm45224-201ENSMUST00000208203 414 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm12058-201ENSMUST00000118614 437 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm15547-201ENSMUST00000122152 333 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm23119-201ENSMUST00000158610 140 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm10076-201ENSMUST00000073238 384 ntBASIC13.3□□□□□ -0.28
Scn1aA2APX8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms