Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn3Q9ES97 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn3Q9ES97 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn3Q9ES97 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.65□□□□□ -0.22
Rtn3Q9ES97 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gm16202-201ENSMUST00000117532 544 ntBASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gm12957-201ENSMUST00000117835 377 ntBASIC13.64□□□□□ -0.23
Rtn3Q9ES97 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Proscos-202ENSMUST00000178990 666 ntBASIC13.64□□□□□ -0.23
Rtn3Q9ES97 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gm43630-201ENSMUST00000201550 776 ntBASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn3Q9ES97 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Gm8810-201ENSMUST00000172895 754 ntBASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Gm40466-201ENSMUST00000212174 422 ntBASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn3Q9ES97 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rtn3Q9ES97 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms