Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb20Q91XZ9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14906-201ENSMUST00000119265 390 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11255-201ENSMUST00000120448 1180 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm44137-201ENSMUST00000203670 367 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm44128-201ENSMUST00000204909 219 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm45240-201ENSMUST00000211437 674 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb20Q91XZ9 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11393-201ENSMUST00000118019 288 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14480-201ENSMUST00000118521 433 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14840-201ENSMUST00000122135 594 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm5655-201ENSMUST00000221078 901 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 CT010505.1-201ENSMUST00000227026 396 ntBASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms