Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Gm6152-201ENSMUST00000151704 340 ntBASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Gm2495-201ENSMUST00000191160 466 ntBASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb4Q91XZ6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm12928-201ENSMUST00000117115 573 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm16202-201ENSMUST00000117532 544 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm11978-201ENSMUST00000122315 466 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm18018-201ENSMUST00000198273 408 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms