Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 AP001582.1-201ENST00000525856 295 ntBASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 LBH-202ENST00000401506 485 ntTSL 3 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 AC079178.1-201ENST00000420915 656 ntBASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 FGFR3P5-201ENST00000564496 886 ntBASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CFAP43Q8NDM7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 KRT18P25-201ENST00000508931 1278 ntBASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 AC145423.3-201ENST00000615987 467 ntBASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 AL118508.1-201ENST00000613502 2345 ntBASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC24.24■■□□□ 1.47
CFAP43Q8NDM7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 AC018695.7-201ENST00000624587 2492 ntBASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 SERPINA13P-202ENST00000478994 924 ntBASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CFAP43Q8NDM7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 CYP46A4P-201ENST00000414953 267 ntBASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 MAGEA5-201ENST00000446757 942 ntBASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 SPTLC1P5-201ENST00000450718 252 ntBASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 AC044849.1-201ENST00000519737 1188 ntBASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 AL645728.2-202ENST00000641679 227 ntBASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CFAP43Q8NDM7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms