Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm21769-201ENSMUST00000211922 111 ntBASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap1Q8BTW8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm14381-201ENSMUST00000122105 414 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm38092-201ENSMUST00000195600 653 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Mir339-201ENSMUST00000083659 96 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms