Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.25□□□□□ -0.29
Trim62Q80V85 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim62Q80V85 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.25□□□□□ -0.29
Trim62Q80V85 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim62Q80V85 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm22018-201ENSMUST00000104357 131 ntBASIC13.24□□□□□ -0.29
Trim62Q80V85 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm8738-201ENSMUST00000172606 329 ntBASIC13.24□□□□□ -0.29
Trim62Q80V85 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm27572-201ENSMUST00000183702 255 ntBASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm45880-201ENSMUST00000213041 853 ntBASIC13.24□□□□□ -0.29
Trim62Q80V85 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.24□□□□□ -0.29
Trim62Q80V85 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.24□□□□□ -0.29
Trim62Q80V85 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim62Q80V85 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim62Q80V85 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Gm16296-201ENSMUST00000159905 325 ntBASIC13.23□□□□□ -0.29
Trim62Q80V85 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Gm9899-201ENSMUST00000065519 555 ntBASIC13.23□□□□□ -0.29
Trim62Q80V85 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim62Q80V85 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms