Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh19Q80TF3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh19Q80TF3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh19Q80TF3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh19Q80TF3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm11222-201ENSMUST00000119005 738 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm7584-201ENSMUST00000175829 940 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm43930-201ENSMUST00000203868 845 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm24526-201ENSMUST00000082921 158 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh19Q80TF3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm11964-201ENSMUST00000120982 444 ntBASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh19Q80TF3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms