Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm5354-201ENSMUST00000182417 973 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm27702-201ENSMUST00000184512 56 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm29667-201ENSMUST00000190817 490 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm6458-201ENSMUST00000211573 635 ntBASIC11.71□□□□□ -0.53
Hmgn1P18608 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmgn1P18608 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn1P18608 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn1P18608 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn1P18608 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn1P18608 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.71□□□□□ -0.54
Hmgn1P18608 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn1P18608 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.71□□□□□ -0.54
Hmgn1P18608 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn1P18608 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn1P18608 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Hmgn1P18608 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Gm27838-201ENSMUST00000184829 128 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Gm28760-201ENSMUST00000185995 736 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.7□□□□□ -0.54
Hmgn1P18608 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn1P18608 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.7□□□□□ -0.54
Hmgn1P18608 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.69□□□□□ -0.54
Hmgn1P18608 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Hmgn1P18608 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Gm14350-201ENSMUST00000116642 640 ntBASIC11.69□□□□□ -0.54
Hmgn1P18608 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Hmgn1P18608 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.69□□□□□ -0.54
Hmgn1P18608 Gm7063-201ENSMUST00000186840 981 ntBASIC11.69□□□□□ -0.54
Hmgn1P18608 Gm44069-201ENSMUST00000204898 506 ntBASIC11.69□□□□□ -0.54
Hmgn1P18608 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.69□□□□□ -0.54
Hmgn1P18608 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hmgn1P18608 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hmgn1P18608 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms