Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.42□□□□□ -0.42
CD28P10747 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.42□□□□□ -0.42
CD28P10747 AC008894.3-201ENST00000624324 3103 ntBASIC12.42□□□□□ -0.42
CD28P10747 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CD28P10747 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 KRT8P37-201ENST00000451609 1420 ntBASIC12.42□□□□□ -0.42
CD28P10747 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD28P10747 ALOX12P2-203ENST00000570921 1945 ntBASIC12.42□□□□□ -0.42
CD28P10747 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.42□□□□□ -0.42
CD28P10747 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.42□□□□□ -0.42
CD28P10747 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
CD28P10747 REXO1L8P-201ENST00000604378 1897 ntBASIC12.42□□□□□ -0.42
CD28P10747 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CD28P10747 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD28P10747 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 TSPY26P-202ENST00000565928 3884 ntBASIC12.41□□□□□ -0.42
CD28P10747 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.41□□□□□ -0.42
CD28P10747 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 RAB43P1-201ENST00000561790 589 ntBASIC12.41□□□□□ -0.42
CD28P10747 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CD28P10747 RARRES2P5-201ENST00000564013 466 ntBASIC12.41□□□□□ -0.42
CD28P10747 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.41□□□□□ -0.42
CD28P10747 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
CD28P10747 AL162274.1-201ENST00000617191 1098 ntBASIC12.41□□□□□ -0.42
CD28P10747 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD28P10747 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.41□□□□□ -0.42
CD28P10747 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD28P10747 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 Z97205.2-201ENST00000564697 1639 ntBASIC12.4□□□□□ -0.42
CD28P10747 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 CDC14C-201ENST00000428251 1719 ntBASIC12.4□□□□□ -0.42
CD28P10747 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
CD28P10747 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CD28P10747 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.4□□□□□ -0.42
CD28P10747 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms