Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.72□□□□□ -0.53
P01852 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.72□□□□□ -0.53
P01852 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.72□□□□□ -0.53
P01852 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Mir686-201ENSMUST00000102174 109 ntBASIC11.72□□□□□ -0.53
P01852 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.72□□□□□ -0.53
P01852 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Gm12957-201ENSMUST00000117835 377 ntBASIC11.72□□□□□ -0.53
P01852 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
P01852 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Gm37424-201ENSMUST00000191727 561 ntBASIC11.72□□□□□ -0.53
P01852 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.72□□□□□ -0.53
P01852 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Gm19163-201ENSMUST00000223313 780 ntBASIC11.72□□□□□ -0.53
P01852 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.72□□□□□ -0.53
P01852 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.72□□□□□ -0.53
P01852 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P01852 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
P01852 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.72□□□□□ -0.53
P01852 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P01852 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.71□□□□□ -0.53
P01852 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.71□□□□□ -0.53
P01852 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P01852 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
P01852 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
P01852 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P01852 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
P01852 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P01852 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.71□□□□□ -0.53
P01852 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.71□□□□□ -0.53
P01852 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.71□□□□□ -0.53
P01852 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.71□□□□□ -0.53
P01852 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.71□□□□□ -0.53
P01852 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P01852 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.71□□□□□ -0.54
P01852 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
P01852 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
P01852 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P01852 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P01852 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms