Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn7aB1AYL1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Gm15573-201ENSMUST00000119487 540 ntBASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Gm12407-201ENSMUST00000180219 324 ntBASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Gm19287-201ENSMUST00000203190 358 ntBASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.12■□□□□ 0.17
Scn7aB1AYL1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn7aB1AYL1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm11246-201ENSMUST00000120880 345 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm13461-201ENSMUST00000120980 662 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm13263-201ENSMUST00000121271 838 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm8731-201ENSMUST00000118088 412 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm6485-201ENSMUST00000160676 439 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Gm38151-201ENSMUST00000195085 289 ntBASIC16.11■□□□□ 0.17
Scn7aB1AYL1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn7aB1AYL1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Gm4310-201ENSMUST00000177847 889 ntBASIC16.1■□□□□ 0.17
Scn7aB1AYL1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.1■□□□□ 0.17
Scn7aB1AYL1 Gm5733-201ENSMUST00000190232 939 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms