Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.9□□□□□ -0.35
Col4a6B1AVK5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.9□□□□□ -0.35
Col4a6B1AVK5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col4a6B1AVK5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col4a6B1AVK5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gm37458-201ENSMUST00000194055 410 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col4a6B1AVK5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms